PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02536.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 157aa    MW: 17168.6 Da    PI: 10.9096
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02536.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-172271355
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  + GVr+++ +gr++AeIrd + ng  +r++lg+f++ e Aa a+++a+++ +g
  Zpz_sc02536.1.g00010.1.am.mk 22 FIGVRRRP-WGRFAAEIRDSTRNG--ARVWLGTFDSVEAAAMAYDQAALSARG 71
                                  57******.**********44465..***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003807.4E-252185IPR001471AP2/ERF domain
PROSITE profilePS5103219.9542179IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-182276IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.5E-242276IPR001471AP2/ERF domain
PRINTSPR003677.0E-82233IPR001471AP2/ERF domain
PfamPF008475.9E-132271IPR001471AP2/ERF domain
PRINTSPR003677.0E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
LHRLPVIQHY LQRPSSPCKE AFIGVRRRPW GRFAAEIRDS TRNGARVWLG TFDSVEAAAM  60
AYDQAALSAR GPAAVLIVPV ERSSVAAGGG TPVLQLKSRH SKRKRRKKSE TAAAAAAANG  120
SAIGRNKSVM SEQRRFVVEL EDLGADYLEE LLRISEC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-212284668ATERF1
3gcc_A9e-212284668ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101106KRKRRK
2101107KRKRRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004959050.12e-43PREDICTED: ethylene-responsive transcription factor 1-like
SwissprotQ8LDC88e-35ERF92_ARATH; Ethylene-responsive transcription factor 1B
TrEMBLK4A2J12e-43K4A2J1_SETIT; Uncharacterized protein
STRINGSi033089m6e-43(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-29ethylene response factor 1